️Tools And Methods
also see “awesome-neuroimaging”
This (:tools
) namespace includes what would be in the methods second of a paper. The companion :brain
namespace includes what would be in the results section. see :brain vs :tools
Magnetic Resonance Imaging (MRI)
- Time-averaged T2* - nT2* of BOLD EPI (fMRI), an lncdtool
- fsl (FSL@Oxford) - tools for FMRI, MRI and diffusion brain imaging data
- freesurfer (FS@MGH) - information about running freesurfer for structural MRI data processing, segmentation, and surface generation
- MoTrak - Loeffler Simulator Motion Tracking - motion awareness in MR simulation (proprietary sofware)
- surface-based analyses - information about working with cortical surface files in R and with connectome workbench
- BIDS apps - a list of useful software packages that work on BIDS-formatted data (BIDS apps)
Magnetic Resonance Spectroscopy Imaging (MRSI)
Electroencephalogram (EEG)
Behavioral Tasks
Statistical Methods
Coding Languages and software tools
- R (used by R Studio)
General
Wiki
Missing Pages
Linked from somewhere but the page doesn't exist yet (“orphans wanted”).
# | ID | Links |
---|---|---|
1 | tools:matlab | 4 : Show backlinks |
2 | tools:psychtoolbox | 3 : Show backlinks |
3 | tools:crc | 2 : Show backlinks |
4 | tools:mix | 2 : Show backlinks |
5 | tools:rhea | 2 : Show backlinks |
6 | tools:vim | 2 : Show backlinks |
7 | tools:3dmvm | 1 : Show backlinks |
8 | tools:afni_gui | 1 : Show backlinks |
9 | tools:atlases | 1 : Show backlinks |
10 | tools:autoeyescore | 1 : Show backlinks |
11 | tools:bids | 1 : Show backlinks |
12 | tools:deepmreye | 1 : Show backlinks |
13 | tools:fmriprep | 1 : Show backlinks |
14 | tools:fsl | 1 : Show backlinks |
15 | tools:gam | 1 : Show backlinks |
16 | tools:hurst | 1 : Show backlinks |
17 | tools:julia | 1 : Show backlinks |
18 | tools:nda | 1 : Show backlinks |
19 | tools:psychopy | 1 : Show backlinks |
20 | tools:rest | 1 : Show backlinks |
21 | tools:rlhabittask | 1 : Show backlinks |
22 | tools:rsfmri | 1 : Show backlinks |
23 | tools:tmux | 1 : Show backlinks |
24 | tools:tsnr | 1 : Show backlinks |