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Docs » Source Localization

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Source Localization

Version: brainstorm3
Package is in Shane/resources/brainstorm3
Need to add its path to matlab and then just run the command brainstorm
Running/ installing brainstorm will automatically make a brainstorm_db folder in the same folder where brainstorm3 is saved (in my case resources)

Brainstorm Organization

  • Each subject is then saved as a protocol that is then saved in that database folder
  • With each protocol there is an anat and data folder
    • anat: anatomy
      • contains the anatomy files that were uploaded (from their freesurfer output)
    • data: your brain data
      • contains eeg files that you load in

Brainstorm Scripts

  • I have one script for each task epoch (fix, delay, resting state, etc)
  • Sets the necessary paths to the freesurfer folders, list of glasser parcellations, merge 7t, and preprocessed data
  • * We need the subject folders that have 'long' in the title so it checks for that and if yes, moves on
 if contains(FSsubfolder,'long') 
  • Define the subject folder (protocol), DBfolder is the brainstorm_db, and then I named it sourceLocal_beamforming_ subjectID based on their MRI date, not eeg date to match the freesurfer file
 subjectDBfolder = [DBfolder '/sourceLocal_beamforming_' SubjectNameMRI]; 
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