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Docs » Cog Grant

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Cog Grant

Scanned with 3T on southside (BIRC → NIC) before it was shut down (c. 2019).

Tasks

MR

Functional MRI tasks include 4 runs of Antisaccade Tasks block design (useful for background) and 3 runs of Memory Guided Saccade (MGS) Task. There is also a dwi and structural scan.

for d in /Volumes/Hera/Raw/MRprojects/CogLong/150411090938/*; do 
  find $d -type f -iname '*dcm' -exec\
   dicom_hinfo \
       -sepstr \| -no_name -full_entry \
       -tag 0018,1030 -tag 0018,0080 -tag 0018,1310 {} \; \
       -quit
   done | sed 's/^\|$/|/g'
acq name TR Acq Mat
circle_localizer20 0 256 256 0
trufi_sag 5.43 0 256 256 0
t2_tse_tra4790 0 256 256 0
t1_mprage_sag_ns_tilt 1630 0 256 256 0
ep2d_diff_mddw6 3900 128 0 0 128
ep2d_bold_9VGSANTI1500 64 0 0 64
ep2d_bold_9VGSANTI1500 64 0 0 64
ep2d_bold_9VGSANTI1500 64 0 0 64
ep2d_bold_9VGSANTI1500 64 0 0 64
ep2d_bold_MGS 1500 64 0 0 64
ep2d_bold_MGS 1500 64 0 0 64
ep2d_bold_MGS 1500 64 0 0 64
t1_mprage_sag_ns_tilt 1630 0 256 256 0

Behavioral

Tasks recorded in the original MS Access Database (exported to postgresql)

lncddb "
  select task,
         count(*) cnt,
         to_char(min(vtimestamp),'YYYY-MM-DD') first,
         to_char(max(vtimestamp),'YYYY-MM-DD') last
  from visit_task natural
  join visit_study natural join visit
  where study like 'Cog%'
  group by task
  having count(*) > 10
  order by cnt desc;" | sed 's/^\|$\|\t/|/g'
task cnt firstlast
Demographics8802000-01-012019-05-11
PaperStroop8452004-01-192019-05-11
PrePostBehavioral8372005-05-122019-05-11
CANTABQuestionnaire8312005-05-122019-05-11
SensationSeeking6802006-01-252019-05-11
PrePostScan6242005-07-052019-06-08
Puberty5812005-03-102018-01-26
WASI5532000-01-012018-08-25
Handedness4772000-01-012018-01-26
CBCL122006-08-242010-08-11
EpilepsyQuestionnaire112006-08-242008-12-03
BRIEF112006-08-242008-12-03
CDI112006-08-242008-12-03
SCARED112006-08-242008-12-03

Sensation Seeking

select measures::json 
 from visit_task 
 natural join visit_study
 where study like 'Cog%' and
       task like 'SensationSeeking%'
 limit 3;
 
                                   measures                                    
--------------------------------------------------------------------------------
 {"Notes": "", "sssBS": 1, "sssES": 2, "sssDIS": 1, "sssTAS": 6, "sssTOT": 10}
 {"Notes": "", "sssBS": 3, "sssES": 3, "sssDIS": 4, "sssTAS": 4, "sssTOT": 14}
 {"Notes": "", "sssBS": 1, "sssES": 6, "sssDIS": 4, "sssTAS": 10, "sssTOT": 21}
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