7T Resting State fMRI
Resting State Parameters
2x2x2mm3, 220 volumes, 2.18-2.23s TR
3dinfo -ad3 -n4 /Volumes/Hera/Raw/BIDS/7TBrainMech/sub-10129/20180917/func/sub-10129_task-rest_run-01_bold.nii.gz 2.040816 2.040816 1.999999 98 98 48 220 3dinfo -tr /Volumes/Hera/preproc/7TBrainMech_rest/MHRest_nost_ica/10129_20180917/brnaswdkm_func_4.nii.gz 2.180000
Variable TR
EPI TR/TE tweaks during study (for scanner stability, SAR/saftey?). See /Volumes/Hera/Projects/7TBrainMech/scripts/mri/014_actual_tr.bash
use in Makefile
(txt/calc_rest_tr.txt
)
perl -MList::Util=min,max -sale ' $tr=sprintf("%.2f",$F[1]); push @{$a{$tr}}, $& if m/\d{8}/; END {print join "\t", $_, $#{$a{$_}}, min(@{$a{$_}}), max(@{$a{$_}}) for(keys %a)} ' < txt/calc_rest_tr.txt 2.23 46 20220602 20231110 2.18 43 20180129 20190823 2.20 194 20180917 20211211 0.00 6 20180312 20190816