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LNCD
Admin » LNCD Software

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tools:software [2024/05/28 14:07] – remove lncdshell, move waitforjobs into lncdtools willtools:software [2026/09/29 12:31] (current) – [LNCD Software] will
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 ====== LNCD Software ====== ====== LNCD Software ======
 +Also see [[admin:software:researcher]] for a new computer software install check list
 ===== Homegrown ===== ===== Homegrown =====
 R, generic, and shell tools made specifically for our research R, generic, and shell tools made specifically for our research
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 ===== External ===== ===== External =====
-Here's a list of external software used for research. This is ideal reference for OAC Administered Systems. Also see [[https://github.com/NPACore/awesome-neuroimaging|awesome-neuroimaging list]]+Here's a list of external software used for research. This is ideal reference for OAC Administered Systems. Also see [[https://github.com/NPACore/awesome-neuroimaging|awesome-neuroimaging list]] and [[https://github.com/NPACore/NPACore.github.io/blob/main/docs/projects/software/macos-admin.bash|Mac OS OAC install script]]
  
  
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 |xcode ((<code=shell>xcode-select --install</code>)) | afni depends(homebrew) and R libaries (compiling) | |xcode ((<code=shell>xcode-select --install</code>)) | afni depends(homebrew) and R libaries (compiling) |
 |[[https://brew.sh/|homebrew]] ((<code>/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install.sh)" |[[https://brew.sh/|homebrew]] ((<code>/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install.sh)"
- brew install python gfortran libxml netpbm openblas lapack openconnect virtualbox vagrant{,-manager}</code>)) | AFNI, R library compiling, singluarity image |+ brew install python gfortran libxml++ netpbm openblas lapack openconnect vagrant{,-manager} # virtualbox</code>)) | AFNI, R library compiling, singluarity image |
 |[[https://www.xquartz.org/|Xquartz]] | AFNI and ssh X11-forwarding | |[[https://www.xquartz.org/|Xquartz]] | AFNI and ssh X11-forwarding |