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tools:project_reproducibility_guides_with_gh-pages [2025/08/18 10:41] – [Creating a Reproducibility Guide using Github Pages] willtools:project_reproducibility_guides_with_gh-pages [2025/08/18 10:44] (current) – [Step 4. doc/index.md] will
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 This file includes all of the text, links, etc. that you want to include on your Project Page! The text you write should comply to and will follow the formatting of Markdown syntax: https://github.com/Manuel83/sample/blob/master/index.md. Here is [[https://github.com/PennLINC/thalamocortical_development/blob/gh-pages/index.md | an example of an index.md file]] that served as one of Valerie’s study reproducibility guides.  This file includes all of the text, links, etc. that you want to include on your Project Page! The text you write should comply to and will follow the formatting of Markdown syntax: https://github.com/Manuel83/sample/blob/master/index.md. Here is [[https://github.com/PennLINC/thalamocortical_development/blob/gh-pages/index.md | an example of an index.md file]] that served as one of Valerie’s study reproducibility guides. 
  
 +Here's a contrived example
 +<code>
 +# My Project
 +This project **does amazing things**. Use it like
 +```bash
 +./01_organize_data.bash
 +./02_run_stats.R
 +```
 +
 +> [!NOTE]
 +> Watch out for this made up statistical //edge case//
 +</code>
 ===== Step 5. commit changes ===== ===== Step 5. commit changes =====