Differences

This shows you the differences between two versions of the page.

--- tools:hc [2023/09/19 10:08] – ↷ Page moved from tools:mrsi:hc to tools:hc sdm63
+++ tools:hc [2025/09/15 20:13] (current) – will
@@ Line 1: / Line 1: @@
-====== MRSI in HC @ 7T ======
+======  MRSI in HC @ 7T (scripts) ======
   * [[https://docs.google.com/document/d/1z_47ybrqkBTTF6tTpbATS_yeBMJDHNCMgbMGyEfbXs8/edit?usp=sharing|Hippocampus Coordinates]]
-  * ''/Volumes/Hera/Projects/7TBrainMech/scripts/mri/Hc''
+  * script directory: ''/Volumes/Hera/Projects/7TBrainMech/scripts/mri/Hc''
-  * ''/home/ni_tools/matlab_toolboxes/MRRC/SVR1HFinal/SVR1H2015.fig''
+  * matlab gui program (from MRRC/Victor, Hoby): ''/home/ni_tools/matlab_toolboxes/MRRC/SVR1HFinal/SVR1H2015.fig''
-  * [[tools:mrsi:lcmodel]]
+  * [[tools:lcmodel]]
+Review from 2024-12-09:
+  * 230 visits in ''/Volumes/Hera/Projects/7TBrainMech/scripts/mri/Hc/txt/all_hc.csv''
+  * spectrum and model fit plots combined in ''/Volumes/Hera/Projects/7TBrainMech/scripts/mri/Hc/pdf/hpc_pg_2023-03-07.pdf'' (see ''gen_pdf.bash'') \\
+{{:tools:pasted:20241209-125854.png?200}}
+  * 12 ROI coordinate placement over reslice and localizer-aligned anatomical on ''/Volumes/Hera/Projects/7TBrainMech/scripts/mri/Hc/qc/hc_placement.pdf'' (see ''view_placements.jl'') \\
+{{:tools:pasted:20241209-125824.png?200}}