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brain:thalamus [2025/09/09 16:22] – [Segmentation] willbrain:thalamus [2025/09/09 16:23] (current) – [MRSI] will
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 ====== Thalamus ====== ====== Thalamus ======
 +
 +===== MRSI =====
 +
 +Interest in Thalamus from Sarpal, via FC:
 +> [[:brain:NAAG]] is meant to modulate glutamatergic activity, so quetion was whether this predicts thalamic functional connectivity 
 +> running a seeded [[brain:functionalconnectivity]] analysis on the thalamus and regressing voxelwise values vs NAAG seemed like a relatively easy thing to check
 +
  
 ===== Segmentation ===== ===== Segmentation =====
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 For [[tools:freesurfer]] segmentation, see [[https://freesurfer.net/fswiki/ThalamicNuclei|segmentThalamicNuclei.sh]].  For [[tools:freesurfer]] segmentation, see [[https://freesurfer.net/fswiki/ThalamicNuclei|segmentThalamicNuclei.sh]]. 
  
-==== MRSI ==== 
- 
-Interest in Thalmus from Sarpal, via FC: 
-> NAAG is meant to modulate glutamatergic activity, so quetion was whether this predicts thalamic functional connectivity  
-> running a seeded FC analysis on the thalamus and regressing voxelwise values vs NAAG seemed like a relatively easy thing to check 
 ==== 7T ==== ==== 7T ====