Schaefer Atlas

Volumetric

See Yeo Lab Schaefer MNI @ github and on rhea /opt/ni_tools/atlas/schaefer2018/ (1000Parcels to 200Parcels for both 17 and 7 Network variations)

3dresample \
  -inset /opt/ni_tools/atlas/schaefer2018/Schaefer2018_LocalGlobal/Parcellations/MNI/Schaefer2018_1000Parcels_17Networks_order_FSLMNI152_1mm.nii.gz \
  -master $MY_FUNC_EXAMPLE \
  -rmode NN \
  -output schaefer-N17P1000_res-func.nii.gz

Plotting regional statistics in Schaefer atlases is easy in R with ggsegSchaefer